Tools

BiBiServ Bielefeld University Bioinformatics Server Biological Software @ the Institut Pasteur
common cis-element search SCOPE access EMBOSS web server
Multiple SNP Query Tool Prediction of all possible CAPS markers for 96 ecotypes
RNA World Website @ IMB Jena RNAfold
multiple sequence alignment Clustal Omega multiple sequence alignment DIALIGN-T
local alignments pep/seq (LALIGN) global alignments pep/seq (ALIGN)
Center for Biological Sequence Analysis (CBS) @ DTU GeneDoc Download (GCG MSF file viewer)
CODEHOP design of degenerate primers Primer3 primer design
NCBI-BLAST NCBI primer design